Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | SAMN05421820_106247 | Not Available | Positive | 4435563 - 4436198 | 24037.8 |
| cytochrome c-type biogenesis protein ccme | SAMN05421820_106248 | Not Available | Positive | 4436354 - 4436764 | 15548.7 |
| cytochrome c-type biogenesis protein ccmf | SAMN05421820_106249 | Not Available | Positive | 4436770 - 4439238 | 92658.3 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN05421820_106250 | Not Available | Positive | 4439258 - 4440019 | 27959.7 |
| ferredoxin, 2fe-2s | SAMN05421820_106251 | Not Available | Positive | 4440063 - 4440395 | 12122.4 |
| fes assembly protein iscx | SAMN05421820_106252 | Not Available | Positive | 4440414 - 4440656 | 9788.26 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN05421820_106253 | Not Available | Positive | 4440662 - 4441189 | 19263.4 |
| hypothetical protein | SAMN05421820_106254 | Not Available | Positive | 4441314 - 4441703 | 14347.1 |
| septum formation protein | SAMN05421820_106255 | Not Available | Positive | 4441773 - 4442354 | 21730.1 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN05421820_106256 | Not Available | Negative | 4442351 - 4443256 | 33126.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

