Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel domain-containing protein | SAMN05421820_106217 | Not Available | Positive | 4412159 - 4412683 | 18519.2 |
| abc-2 type transport system permease protein | SAMN05421820_106218 | Not Available | Positive | 4412716 - 4413444 | 26933.6 |
| abc-2 type transport system permease protein | SAMN05421820_106219 | Not Available | Positive | 4413438 - 4415114 | 62367.7 |
| dna polymerase-3 subunit beta | SAMN05421820_106220 | Not Available | Positive | 4415188 - 4416273 | 39753.3 |
| protein of unknown function | SAMN05421820_106221 | Not Available | Positive | 4416360 - 4417049 | 24040.8 |
| membrane-associated protein | SAMN05421820_106222 | Not Available | Positive | 4417123 - 4417782 | 24384.4 |
| zinc dependent phospholipase c | SAMN05421820_106223 | Not Available | Negative | 4417779 - 4418735 | 36959.8 |
| molecular chaperone hsca | SAMN05421820_106224 | Not Available | Negative | 4418771 - 4420630 | 67417.6 |
| protein of unknown function | SAMN05421820_106225 | Not Available | Negative | 4420670 - 4421770 | 42447.7 |
| dihydroorotase | SAMN05421820_106226 | Not Available | Negative | 4421770 - 4423104 | 49557.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

