Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_106157 | Not Available | Positive | 4353388 - 4353855 | 17691.3 |
| winged helix dna-binding domain-containing protein | SAMN05421820_106158 | Not Available | Positive | 4353859 - 4354941 | 41120.5 |
| hypothetical protein | SAMN05421820_106159 | Not Available | Positive | 4355223 - 4355393 | 6321.51 |
| regulator of nucleoside diphosphate kinase | SAMN05421820_106160 | Not Available | Positive | 4355511 - 4355912 | 15070.6 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05421820_106161 | Not Available | Negative | 4355984 - 4356955 | 35239.8 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN05421820_106162 | Not Available | Negative | 4356964 - 4357443 | 17878.2 |
| hypothetical protein | SAMN05421820_106163 | Not Available | Positive | 4357514 - 4357618 | 4164.3 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05421820_106164 | Not Available | Positive | 4357590 - 4358258 | 25535.6 |
| dinb superfamily protein | SAMN05421820_106165 | Not Available | Positive | 4358380 - 4358898 | 19667.6 |
| dinb superfamily protein | SAMN05421820_106166 | Not Available | Positive | 4358902 - 4359438 | 20332.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

