Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0755 protein | SAMN05421820_101343 | Not Available | Negative | 425886 - 426935 | 39853.2 |
| pasta domain, binds beta-lactams | SAMN05421820_101344 | Not Available | Negative | 426951 - 427721 | 27928.9 |
| d-alanine-d-alanine ligase | SAMN05421820_101345 | Not Available | Positive | 427868 - 428854 | 36127.4 |
| protein of unknown function | SAMN05421820_101346 | Not Available | Negative | 429143 - 429931 | 28910.4 |
| putative efflux protein, mate family | SAMN05421820_101347 | Not Available | Negative | 430263 - 431729 | 52543.9 |
| acyl-coa thioester hydrolase/thioesterase-3 | SAMN05421820_101348 | Not Available | Negative | 432184 - 432603 | 16241.5 |
| small subunit ribosomal protein s15 | SAMN05421820_101349 | Not Available | Positive | 432777 - 433079 | 11435.1 |
| polyribonucleotide nucleotidyltransferase | SAMN05421820_101350 | Not Available | Positive | 433197 - 435344 | 77720.4 |
| ribulose-phosphate 3-epimerase | SAMN05421820_101351 | Not Available | Positive | 435439 - 436110 | 23831.1 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421820_101352 | Not Available | Positive | 436111 - 438492 | 89149.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

