Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine c-acetyltransferase | SAMN05421820_106127 | Not Available | Positive | 4312110 - 4313351 | 46267.0 |
| hypothetical protein | SAMN05421820_106128 | Not Available | Positive | 4313588 - 4313767 | 6554.85 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05421820_106129 | Not Available | Negative | 4313835 - 4314716 | 31591.9 |
| dna ligase (nad+) | SAMN05421820_106130 | Not Available | Negative | 4314726 - 4316711 | 74998.6 |
| hypothetical protein | SAMN05421820_106131 | Not Available | Negative | 4316758 - 4317441 | 26766.3 |
| tyrosyl-trna synthetase | SAMN05421820_106132 | Not Available | Positive | 4317505 - 4318791 | 48041.5 |
| acyl-protein synthetase, luxe | SAMN05421820_106133 | Not Available | Negative | 4318862 - 4319845 | 37099.4 |
| hypothetical protein | SAMN05421820_106134 | Not Available | Negative | 4319875 - 4320225 | 12885.6 |
| penicillin amidase | SAMN05421820_106135 | Not Available | Negative | 4320230 - 4322668 | 91772.8 |
| tonb-dependent receptor plug domain | SAMN05421820_106136 | Not Available | Positive | 4322864 - 4325743 | 104770.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

