Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | SAMN05421820_10677 | Not Available | Positive | 4259336 - 4260208 | 32181.6 |
| glucose-1-phosphate thymidylyltransferase | SAMN05421820_10678 | Not Available | Positive | 4260210 - 4261094 | 32064.0 |
| regulatory protein, luxr family | SAMN05421820_10679 | Not Available | Positive | 4262050 - 4262829 | 29667.3 |
| arac-like ligand binding domain-containing protein | SAMN05421820_10680 | Not Available | Negative | 4262977 - 4263852 | 33947.7 |
| predicted arabinose efflux permease, mfs family | SAMN05421820_10681 | Not Available | Positive | 4263942 - 4265141 | 43197.3 |
| hypothetical protein | SAMN05421820_10682 | Not Available | Negative | 4265138 - 4265344 | 7905.44 |
| 2og-fe(ii) oxygenase superfamily protein | SAMN05421820_10683 | Not Available | Negative | 4265545 - 4266099 | 21705.7 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN05421820_10684 | Not Available | Negative | 4266096 - 4266623 | 18826.8 |
| hypothetical protein | SAMN05421820_10685 | Not Available | Negative | 4266724 - 4267374 | 24845.6 |
| 8-oxo-dgtp diphosphatase | SAMN05421820_10686 | Not Available | Negative | 4267407 - 4268099 | 26866.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

