Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_10667 | Not Available | Positive | 4247690 - 4248790 | 41311.4 |
| glycosyltransferase wbsx | SAMN05421820_10668 | Not Available | Positive | 4248829 - 4249911 | 40231.4 |
| acetyltransferase (isoleucine patch superfamily) | SAMN05421820_10669 | Not Available | Positive | 4250082 - 4250810 | 26384.1 |
| gdsl-like lipase/acylhydrolase family protein | SAMN05421820_10670 | Not Available | Positive | 4250803 - 4251504 | 26373.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_10671 | Not Available | Positive | 4251543 - 4252649 | 42078.1 |
| capsule assembly protein wzi | SAMN05421820_10672 | Not Available | Negative | 4252665 - 4254194 | 56818.6 |
| mannose-1-phosphate guanylyltransferase | SAMN05421820_10673 | Not Available | Negative | 4254217 - 4255296 | 40404.8 |
| udpglucose 6-dehydrogenase | SAMN05421820_10674 | Not Available | Negative | 4255301 - 4256635 | 49054.1 |
| putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN05421820_10675 | Not Available | Positive | 4256875 - 4258266 | 53983.1 |
| dtdp-glucose 4,6-dehydratase | SAMN05421820_10676 | Not Available | Positive | 4258288 - 4259346 | 40331.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

