Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase c | SAMN05421820_10657 | Not Available | Negative | 4234468 - 4236012 | 58099.7 |
| tyrosine-protein phosphatase ywqe | SAMN05421820_10658 | Not Available | Positive | 4236339 - 4237067 | 28118.2 |
| polysaccharide export outer membrane protein | SAMN05421820_10659 | Not Available | Positive | 4237181 - 4237975 | 28759.8 |
| capsular exopolysaccharide family | SAMN05421820_10660 | Not Available | Positive | 4238011 - 4240368 | 87220.0 |
| na+-driven multidrug efflux pump | SAMN05421820_10661 | Not Available | Positive | 4240375 - 4241922 | 57279.0 |
| nitroreductase | SAMN05421820_10662 | Not Available | Positive | 4241935 - 4242942 | 38024.9 |
| polysaccharide pyruvyl transferase | SAMN05421820_10663 | Not Available | Positive | 4242970 - 4244211 | 46601.4 |
| o-antigen ligase | SAMN05421820_10664 | Not Available | Positive | 4244204 - 4245541 | 50662.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_10665 | Not Available | Positive | 4245538 - 4246797 | 48471.9 |
| glycosyltransferase, gt2 family | SAMN05421820_10666 | Not Available | Positive | 4246810 - 4247652 | 32330.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

