Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucokinase | SAMN05421820_101333 | Not Available | Positive | 418361 - 419293 | 32834.0 |
| fucose permease | SAMN05421820_101334 | Not Available | Positive | 419322 - 420539 | 44512.1 |
| fic/doc family protein | SAMN05421820_101335 | Not Available | Negative | 420884 - 421879 | 37773.1 |
| hypothetical protein | SAMN05421820_101336 | Not Available | Positive | 421959 - 422231 | 10709.6 |
| predicted membrane protein | SAMN05421820_101337 | Not Available | Negative | 422400 - 422876 | 17457.4 |
| protein of unknown function | SAMN05421820_101338 | Not Available | Negative | 422873 - 423301 | 15626.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421820_101339 | Not Available | Negative | 423376 - 423951 | 22481.9 |
| Trna-ser | Not Available | Not Available | Positive | 424290 - 424379 | Not Available |
| membrane protein | SAMN05421820_101341 | Not Available | Negative | 424477 - 425466 | 37404.8 |
| acyl-coa thioester hydrolase | SAMN05421820_101342 | Not Available | Negative | 425476 - 425883 | 15625.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

