Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small-conductance mechanosensitive channel | SAMN05421820_10647 | Not Available | Positive | 4218842 - 4221328 | 93487.1 |
| mfs transporter, opa family, glycerol-3-phosphate transporter | SAMN05421820_10648 | Not Available | Negative | 4221361 - 4222623 | 46419.4 |
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | SAMN05421820_10649 | Not Available | Negative | 4222635 - 4223738 | 39976.7 |
| hypothetical protein | SAMN05421820_10650 | Not Available | Positive | 4223774 - 4223893 | 4644.72 |
| hypothetical protein | SAMN05421820_10651 | Not Available | Positive | 4223915 - 4224169 | 9289.07 |
| uncharacterized iron-regulated membrane protein | SAMN05421820_10652 | Not Available | Negative | 4224166 - 4225701 | 57946.1 |
| hypothetical protein | SAMN05421820_10653 | Not Available | Negative | 4225958 - 4226278 | 12341.8 |
| pas domain s-box-containing protein | SAMN05421820_10654 | Not Available | Positive | 4226696 - 4228015 | 50373.6 |
| pas domain s-box-containing protein | SAMN05421820_10655 | Not Available | Positive | 4228053 - 4230269 | 84672.7 |
| dyp-type peroxidase family | SAMN05421820_10656 | Not Available | Positive | 4230484 - 4234428 | 147204.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

