Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | SAMN05421820_10637 | Not Available | Positive | 4205833 - 4207593 | 67167.8 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN05421820_10638 | Not Available | Negative | 4207596 - 4209065 | 55311.1 |
| fmn-dependent nadh-azoreductase | SAMN05421820_10639 | Not Available | Positive | 4209142 - 4209783 | 24229.8 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421820_10640 | Not Available | Negative | 4209839 - 4210273 | 16272.7 |
| hypothetical protein | SAMN05421820_10641 | Not Available | Negative | 4210419 - 4211774 | 52766.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421820_10642 | Not Available | Positive | 4211876 - 4212478 | 22799.4 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05421820_10643 | Not Available | Positive | 4212568 - 4213236 | 24331.6 |
| wgr domain-containing protein, predicted dna-binding domain in molr | SAMN05421820_10644 | Not Available | Positive | 4213443 - 4216532 | 119433.0 |
| swim zinc finger | SAMN05421820_10645 | Not Available | Positive | 4216539 - 4217867 | 49590.0 |
| hypothetical protein | SAMN05421820_10646 | Not Available | Negative | 4217881 - 4218729 | 31507.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

