Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycii-related domain-containing protein | SAMN05421820_10627 | Not Available | Positive | 4192434 - 4192784 | 12980.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_10628 | Not Available | Positive | 4192876 - 4194051 | 44444.9 |
| dna-binding transcriptional regulator, laci/purr family | SAMN05421820_10629 | Not Available | Negative | 4193974 - 4195779 | 67851.0 |
| starch-binding associating with outer membrane | SAMN05421820_10630 | Not Available | Negative | 4195889 - 4197625 | 65531.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_10631 | Not Available | Negative | 4197638 - 4201024 | 124744.0 |
| fecr protein | SAMN05421820_10632 | Not Available | Negative | 4201282 - 4202424 | 43219.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_10633 | Not Available | Negative | 4202505 - 4203044 | 21093.2 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05421820_10634 | Not Available | Negative | 4203479 - 4204234 | 26574.7 |
| dna-binding transcriptional regulator, acrr family | SAMN05421820_10635 | Not Available | Positive | 4204448 - 4205026 | 21406.8 |
| acetyltransferase (gnat) family protein | SAMN05421820_10636 | Not Available | Negative | 4205177 - 4205614 | 16295.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

