Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_1067 | Not Available | Positive | 4170371 - 4173727 | 123699.0 |
| starch-binding associating with outer membrane | SAMN05421820_1068 | Not Available | Positive | 4173757 - 4175304 | 57708.7 |
| glycosyl hydrolase family 65, n-terminal domain | SAMN05421820_1069 | Not Available | Positive | 4175380 - 4177665 | 86264.6 |
| calcineurin-like phosphoesterase | SAMN05421820_10610 | Not Available | Negative | 4177850 - 4178854 | 38343.3 |
| starch-binding associating with outer membrane | SAMN05421820_10611 | Not Available | Negative | 4178856 - 4180376 | 56463.0 |
| iron complex outermembrane recepter protein | SAMN05421820_10612 | Not Available | Negative | 4180397 - 4183387 | 109087.0 |
| fecr protein | SAMN05421820_10613 | Not Available | Negative | 4183412 - 4184410 | 37402.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_10614 | Not Available | Negative | 4184469 - 4184999 | 20870.6 |
| hypothetical protein | SAMN05421820_10615 | Not Available | Positive | 4185111 - 4185230 | 4320.65 |
| dna-binding transcriptional regulator, hxlr family | SAMN05421820_10616 | Not Available | Negative | 4185227 - 4185586 | 13329.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

