Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN05421820_105459 | Not Available | Positive | 4132748 - 4133935 | 43410.3 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN05421820_105460 | Not Available | Positive | 4134038 - 4135075 | 39161.8 |
| hypothetical protein | SAMN05421820_105461 | Not Available | Positive | 4135075 - 4135494 | 14690.7 |
| transcriptional regulator, tetr family | SAMN05421820_105462 | Not Available | Positive | 4135494 - 4136069 | 22168.8 |
| hypothetical protein | SAMN05421820_105463 | Not Available | Negative | 4136073 - 4136651 | 21971.9 |
| hypothetical protein | SAMN05421820_105464 | Not Available | Positive | 4136757 - 4136867 | 4110.13 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN05421820_105465 | Not Available | Positive | 4137108 - 4138589 | 55394.1 |
| hypothetical protein | SAMN05421820_105466 | Not Available | Positive | 4138609 - 4139010 | 15221.3 |
| putative auto-transporter adhesin, head gin domain | SAMN05421820_105467 | Not Available | Negative | 4139166 - 4139882 | 25097.4 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN05421820_105468 | Not Available | Positive | 4140020 - 4140529 | 19193.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

