Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferritin-like domain-containing protein | SAMN05421820_101323 | Not Available | Positive | 397740 - 398459 | 25951.2 |
| ferritin-like domain-containing protein | SAMN05421820_101324 | Not Available | Positive | 398469 - 399389 | 34157.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_101325 | Not Available | Positive | 399437 - 402604 | 115152.0 |
| starch-binding associating with outer membrane | SAMN05421820_101326 | Not Available | Positive | 402616 - 404481 | 68521.0 |
| choline-sulfatase | SAMN05421820_101327 | Not Available | Positive | 404506 - 405867 | 50831.0 |
| heparinase ii/iii-like protein | SAMN05421820_101328 | Not Available | Positive | 405864 - 408554 | 101338.0 |
| two component regulator propeller | SAMN05421820_101329 | Not Available | Positive | 408590 - 412729 | 157522.0 |
| alpha-l-fucosidase | SAMN05421820_101330 | Not Available | Negative | 412777 - 414141 | 51467.7 |
| heparan-sulfate lyase | SAMN05421820_101331 | Not Available | Negative | 414164 - 416128 | 75518.5 |
| heparan-sulfate lyase | SAMN05421820_101332 | Not Available | Negative | 416141 - 418120 | 75273.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

