Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain | SAMN05421820_105389 | Not Available | Negative | 4051354 - 4053999 | 98450.6 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421820_105390 | Not Available | Negative | 4054111 - 4055100 | 37134.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_105391 | Not Available | Negative | 4055148 - 4055756 | 23833.7 |
| calcineurin-like phosphoesterase | SAMN05421820_105392 | Not Available | Negative | 4056011 - 4057141 | 42562.9 |
| hth domain-containing protein | SAMN05421820_105393 | Not Available | Positive | 4057338 - 4058051 | 27345.8 |
| predicted transcriptional regulator ydee, contains arac-type dna-binding domain | SAMN05421820_105394 | Not Available | Positive | 4058103 - 4058561 | 17002.8 |
| putative endopeptidase | SAMN05421820_105395 | Not Available | Positive | 4058628 - 4060670 | 75737.5 |
| cbs domain-containing protein | SAMN05421820_105396 | Not Available | Negative | 4060730 - 4061158 | 15876.5 |
| gh3 auxin-responsive promoter | SAMN05421820_105397 | Not Available | Negative | 4061234 - 4062745 | 58554.9 |
| lipopolysaccharide export system atp-binding protein | SAMN05421820_105398 | Not Available | Negative | 4062765 - 4063499 | 27356.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

