Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd family efflux transporter, mfp subunit | SAMN05421820_105359 | Not Available | Negative | 4028813 - 4029877 | 38034.0 |
| outer membrane protein tolc | SAMN05421820_105360 | Not Available | Negative | 4029874 - 4031232 | 50377.8 |
| tetr/acrr family transcriptional regulator, mexjk operon transcriptional repressor | SAMN05421820_105361 | Not Available | Negative | 4031257 - 4031862 | 23148.1 |
| tetr/acrr family transcriptional regulator, mexjk operon transcriptional repressor | SAMN05421820_105362 | Not Available | Negative | 4031978 - 4032586 | 23291.6 |
| udp-n-acetylmuramate dehydrogenase | SAMN05421820_105363 | Not Available | Positive | 4032712 - 4033761 | 38496.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_105364 | Not Available | Positive | 4033927 - 4034457 | 20312.4 |
| lycopene cyclase domain-containing protein | SAMN05421820_105365 | Not Available | Positive | 4034578 - 4035249 | 25262.9 |
| predicted heme/steroid binding protein | SAMN05421820_105366 | Not Available | Positive | 4035249 - 4035485 | 9161.84 |
| sugar or nucleoside kinase, ribokinase family | SAMN05421820_105367 | Not Available | Negative | 4035529 - 4036449 | 33980.9 |
| Trna-asn | Not Available | Not Available | Positive | 4036594 - 4036670 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

