Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribodipyrimidine photo-lyase | SAMN05421820_105349 | Not Available | Positive | 4012282 - 4013568 | 48783.4 |
| b12 binding domain-containing protein | SAMN05421820_105350 | Not Available | Positive | 4013634 - 4014557 | 35190.0 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN05421820_105351 | Not Available | Positive | 4014623 - 4017418 | 105571.0 |
| 2-oxoglutarate dehydrogenase e2 component | SAMN05421820_105352 | Not Available | Positive | 4017438 - 4018667 | 43418.5 |
| putative auto-transporter adhesin, head gin domain | SAMN05421820_105353 | Not Available | Negative | 4018750 - 4019481 | 25209.8 |
| peptidase family m1 | SAMN05421820_105354 | Not Available | Negative | 4019536 - 4021191 | 63386.1 |
| hypothetical protein | SAMN05421820_105355 | Not Available | Negative | 4021201 - 4023078 | 71201.1 |
| dihydrolipoamide dehydrogenase | SAMN05421820_105356 | Not Available | Positive | 4023229 - 4024635 | 50152.9 |
| hypothetical protein | SAMN05421820_105357 | Not Available | Negative | 4024670 - 4025485 | 30423.1 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05421820_105358 | Not Available | Negative | 4025584 - 4028775 | 115956.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

