Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN05421820_105339 | Not Available | Positive | 3999138 - 4000856 | 61560.9 |
| ompa-ompf porin, oop family | SAMN05421820_105340 | Not Available | Positive | 4000981 - 4002312 | 47290.0 |
| dna-binding transcriptional regulator, marr family | SAMN05421820_105341 | Not Available | Positive | 4002443 - 4002901 | 17197.8 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05421820_105342 | Not Available | Positive | 4002882 - 4005287 | 88646.9 |
| acetyl-coa acyltransferase | SAMN05421820_105343 | Not Available | Positive | 4005312 - 4006490 | 41511.3 |
| acyl-coa dehydrogenase | SAMN05421820_105344 | Not Available | Positive | 4006500 - 4008290 | 65691.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN05421820_105345 | Not Available | Positive | 4008426 - 4008920 | 17943.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN05421820_105346 | Not Available | Positive | 4008917 - 4009831 | 32274.9 |
| deoxyribodipyrimidine photo-lyase | SAMN05421820_105347 | Not Available | Negative | 4009849 - 4011153 | 51166.7 |
| hypothetical protein | SAMN05421820_105348 | Not Available | Negative | 4011219 - 4012109 | 32348.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

