Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_105329 | Not Available | Positive | 3986219 - 3986407 | 7204.6 |
| gaf domain-containing protein | SAMN05421820_105330 | Not Available | Positive | 3986764 - 3987297 | 19800.3 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421820_105331 | Not Available | Positive | 3987316 - 3987759 | 16666.5 |
| badf-type atpase | SAMN05421820_105332 | Not Available | Negative | 3987749 - 3988603 | 31749.6 |
| outer membrane protein tolc | SAMN05421820_105333 | Not Available | Negative | 3988622 - 3989959 | 49646.5 |
| multidrug efflux pump | SAMN05421820_105334 | Not Available | Negative | 3989963 - 3993082 | 114405.0 |
| membrane fusion protein, multidrug efflux system | SAMN05421820_105335 | Not Available | Negative | 3993091 - 3994167 | 38243.5 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN05421820_105336 | Not Available | Positive | 3994476 - 3996263 | 65640.5 |
| hypothetical protein | SAMN05421820_105337 | Not Available | Negative | 3996337 - 3996816 | 17233.5 |
| long-chain acyl-coa synthetase | SAMN05421820_105338 | Not Available | Positive | 3997388 - 3999160 | 65738.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

