Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | SAMN05421820_105309 | Not Available | Positive | 3945816 - 3946988 | 43914.4 |
| atp-binding cassette, subfamily b | SAMN05421820_105310 | Not Available | Positive | 3946993 - 3949149 | 80253.5 |
| arac-type dna-binding protein | SAMN05421820_105311 | Not Available | Negative | 3949178 - 3950023 | 32886.7 |
| fucose permease | SAMN05421820_105312 | Not Available | Positive | 3950202 - 3951449 | 45259.8 |
| alpha,alpha-trehalase | SAMN05421820_105313 | Not Available | Positive | 3951474 - 3952967 | 57279.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421820_105314 | Not Available | Positive | 3953024 - 3955675 | 96746.1 |
| protein of unknown function | SAMN05421820_105315 | Not Available | Negative | 3955745 - 3957037 | 48627.3 |
| hypothetical protein | SAMN05421820_105316 | Not Available | Negative | 3957092 - 3960007 | 107766.0 |
| conserved hypothetical integral membrane protein | SAMN05421820_105317 | Not Available | Positive | 3960333 - 3961601 | 46164.6 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05421820_105318 | Not Available | Positive | 3961684 - 3964209 | 95560.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

