Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramic acid 6-phosphate etherase | SAMN05421820_105289 | Not Available | Negative | 3931414 - 3932310 | 32395.4 |
| carboxyl-terminal processing protease | SAMN05421820_105290 | Not Available | Positive | 3932409 - 3933989 | 58254.2 |
| gtp-binding protein | SAMN05421820_105291 | Not Available | Negative | 3933997 - 3935298 | 49067.4 |
| gtp-binding protein era | SAMN05421820_105292 | Not Available | Negative | 3935348 - 3936226 | 33499.4 |
| Trna-met | Not Available | Not Available | Positive | 3936337 - 3936412 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 3936454 - 3936525 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3936571 - 3936646 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 3936686 - 3936760 | Not Available |
| s-adenosylmethionine decarboxylase | SAMN05421820_105297 | Not Available | Positive | 3936965 - 3937318 | 13547.0 |
| protein of unknown function | SAMN05421820_105298 | Not Available | Positive | 3937318 - 3938631 | 49892.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

