Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase | SAMN05421820_105278 | Not Available | Negative | 3917952 - 3918872 | 34155.6 |
| hypothetical protein | SAMN05421820_105279 | Not Available | Positive | 3918982 - 3919512 | 20711.6 |
| aspartate kinase | SAMN05421820_105280 | Not Available | Positive | 3919847 - 3922294 | 89717.8 |
| homoserine kinase | SAMN05421820_105281 | Not Available | Positive | 3922291 - 3923226 | 33328.5 |
| threonine synthase | SAMN05421820_105282 | Not Available | Positive | 3923235 - 3924545 | 48732.3 |
| heat shock protein hslj | SAMN05421820_105283 | Not Available | Negative | 3924532 - 3924963 | 15251.7 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN05421820_105284 | Not Available | Negative | 3925039 - 3925995 | 35857.4 |
| methionine synthase (b12-dependent) | SAMN05421820_105285 | Not Available | Negative | 3926028 - 3929738 | 137227.0 |
| hypothetical protein | SAMN05421820_105287 | Not Available | Negative | 3930029 - 3930781 | 26837.5 |
| hypothetical protein | SAMN05421820_105288 | Not Available | Negative | 3930833 - 3931402 | 22844.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

