Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized metal-binding protein yced, duf177 family | SAMN05421820_105268 | Not Available | Negative | 3910508 - 3911065 | 21370.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05421820_105269 | Not Available | Negative | 3911106 - 3912185 | 39124.1 |
| 16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferase | SAMN05421820_105270 | Not Available | Positive | 3912453 - 3913235 | 29721.1 |
| d-3-phosphoglycerate dehydrogenase | SAMN05421820_105271 | Not Available | Positive | 3913256 - 3914185 | 34329.4 |
| transcription elongation factor grea | SAMN05421820_105272 | Not Available | Positive | 3914343 - 3914816 | 17160.6 |
| histidine triad (hit) family protein | SAMN05421820_105273 | Not Available | Positive | 3914836 - 3915243 | 14872.2 |
| histidine decarboxylase | SAMN05421820_105274 | Not Available | Negative | 3915344 - 3916534 | 44884.6 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN05421820_105275 | Not Available | Positive | 3916693 - 3917160 | 17795.8 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN05421820_105276 | Not Available | Negative | 3917165 - 3917491 | 12369.8 |
| d-tyrosyl-trna(tyr) deacylase | SAMN05421820_105277 | Not Available | Negative | 3917493 - 3917945 | 16491.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

