Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved repeat domain-containing protein/gliding motility-associated c-terminal domain-containing protein | SAMN05421820_105218 | Not Available | Positive | 3846149 - 3852880 | 236002.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN05421820_105219 | Not Available | Positive | 3852859 - 3853905 | 38846.6 |
| wd40-like beta propeller repeat | SAMN05421820_105220 | Not Available | Positive | 3853907 - 3855850 | 71187.0 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05421820_105221 | Not Available | Negative | 3855965 - 3857959 | 73292.2 |
| glycine hydroxymethyltransferase | SAMN05421820_105222 | Not Available | Positive | 3857987 - 3859258 | 46121.8 |
| pas domain s-box-containing protein | SAMN05421820_105223 | Not Available | Positive | 3859278 - 3862043 | 104166.0 |
| predicted atpase | SAMN05421820_105224 | Not Available | Negative | 3862046 - 3862597 | 21364.1 |
| comf family protein | SAMN05421820_105225 | Not Available | Negative | 3863001 - 3863699 | 26068.0 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN05421820_105226 | Not Available | Negative | 3863744 - 3864796 | 39991.9 |
| 23s rrna pseudouridine2604 synthase | SAMN05421820_105227 | Not Available | Negative | 3864897 - 3865931 | 37601.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

