Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-2-acetamido-2,6-beta-l-arabino-hexul-4-ose reductase | SAMN05421820_105188 | Not Available | Positive | 3808606 - 3809724 | 42858.0 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolysing) | SAMN05421820_105189 | Not Available | Positive | 3809776 - 3810894 | 42505.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_105190 | Not Available | Positive | 3810899 - 3812161 | 47956.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421820_105191 | Not Available | Positive | 3812164 - 3813078 | 33813.0 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN05421820_105192 | Not Available | Positive | 3813081 - 3814028 | 36244.9 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN05421820_105193 | Not Available | Positive | 3814108 - 3816069 | 73642.1 |
| hypothetical protein | SAMN05421820_105194 | Not Available | Positive | 3816081 - 3817697 | 62083.5 |
| right handed beta helix region | SAMN05421820_105195 | Not Available | Positive | 3818105 - 3819367 | 45584.2 |
| glucose-1-phosphate thymidylyltransferase | SAMN05421820_105196 | Not Available | Positive | 3819477 - 3819743 | 9944.2 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05421820_105197 | Not Available | Negative | 3819823 - 3820920 | 41433.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

