Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN05421820_105148 | Not Available | Negative | 3769399 - 3770205 | 30441.7 |
| hypothetical protein | SAMN05421820_105149 | Not Available | Negative | 3770484 - 3771260 | 28443.8 |
| protein of unknown function | SAMN05421820_105150 | Not Available | Negative | 3771265 - 3771495 | 8455.17 |
| gdpmannose 4,6-dehydratase | SAMN05421820_105151 | Not Available | Positive | 3771808 - 3772944 | 43184.7 |
| protein involved in polysaccharide export, contains slbb domain of the beta-grasp fold | SAMN05421820_105152 | Not Available | Positive | 3773041 - 3775509 | 90798.7 |
| hypothetical protein | SAMN05421820_105153 | Not Available | Positive | 3775534 - 3776607 | 39681.5 |
| nad dependent epimerase/dehydratase, llpsf_edh_00030 family | SAMN05421820_105154 | Not Available | Positive | 3776611 - 3777609 | 37328.4 |
| aminotransferase, llpsf_nht_00031 family | SAMN05421820_105155 | Not Available | Positive | 3777611 - 3778762 | 42987.1 |
| acetyltransferase epsm | SAMN05421820_105156 | Not Available | Positive | 3778759 - 3779379 | 21982.9 |
| n-acetylneuraminate synthase/n,n'-diacetyllegionaminate synthase | SAMN05421820_105157 | Not Available | Positive | 3779381 - 3780397 | 37301.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

