Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_101293 | Not Available | Positive | 360226 - 363549 | 119090.0 |
| starch-binding associating with outer membrane | SAMN05421820_101294 | Not Available | Positive | 363569 - 365209 | 61251.6 |
| arylsulfotransferase (asst) | SAMN05421820_101295 | Not Available | Positive | 365325 - 366752 | 53690.4 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421820_101296 | Not Available | Negative | 366749 - 367402 | 24841.5 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05421820_101297 | Not Available | Negative | 367418 - 368077 | 24867.9 |
| hypothetical protein | SAMN05421820_101298 | Not Available | Negative | 368191 - 368853 | 24537.1 |
| hypothetical protein | SAMN05421820_101299 | Not Available | Negative | 368864 - 369337 | 17438.8 |
| hypothetical protein | SAMN05421820_101300 | Not Available | Positive | 369616 - 370752 | 42120.1 |
| hypothetical protein | SAMN05421820_101301 | Not Available | Positive | 370917 - 373229 | 84028.3 |
| protein of unknown function | SAMN05421820_101302 | Not Available | Positive | 373241 - 373522 | 10632.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

