Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| altronate hydrolase | SAMN05421820_105128 | Not Available | Positive | 3743155 - 3744813 | 60112.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421820_105129 | Not Available | Positive | 3744823 - 3745587 | 26567.8 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05421820_105130 | Not Available | Positive | 3745598 - 3746455 | 31361.2 |
| l-fuconolactonase | SAMN05421820_105131 | Not Available | Positive | 3746442 - 3747275 | 32010.1 |
| 3-oxoacyl-[acyl-carrier protein] reductase/l-fucose dehydrogenase | SAMN05421820_105132 | Not Available | Positive | 3747283 - 3748071 | 27998.4 |
| xaa-pro aminopeptidase | SAMN05421820_105133 | Not Available | Negative | 3748415 - 3750190 | 65864.4 |
| type ix secretion system membrane protein, porp/sprf family | SAMN05421820_105134 | Not Available | Negative | 3750580 - 3751470 | 32722.1 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421820_105135 | Not Available | Negative | 3751506 - 3752414 | 32158.1 |
| hypothetical protein | SAMN05421820_105136 | Not Available | Negative | 3752731 - 3759385 | 225243.0 |
| microcystin-dependent protein | SAMN05421820_105137 | Not Available | Negative | 3759424 - 3759987 | 19036.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

