Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421820_105118 | Not Available | Positive | 3733257 - 3733772 | 19127.3 |
| protein of unknown function | SAMN05421820_105119 | Not Available | Positive | 3733803 - 3734579 | 29414.7 |
| protein of unknown function | SAMN05421820_105120 | Not Available | Positive | 3734585 - 3735160 | 21605.8 |
| glucose-1-phosphate thymidylyltransferase | SAMN05421820_105121 | Not Available | Positive | 3735260 - 3736048 | 28743.8 |
| hypothetical protein | SAMN05421820_105122 | Not Available | Positive | 3736134 - 3737078 | 34771.4 |
| arac-type dna-binding protein | SAMN05421820_105123 | Not Available | Negative | 3737134 - 3737955 | 31796.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421820_105124 | Not Available | Negative | 3738062 - 3739081 | 36822.9 |
| alpha-l-fucosidase | SAMN05421820_105125 | Not Available | Positive | 3739338 - 3741482 | 80276.3 |
| mfs transporter, fhs family, l-fucose permease | SAMN05421820_105126 | Not Available | Positive | 3741567 - 3742823 | 45584.1 |
| l-rhamnose mutarotase | SAMN05421820_105127 | Not Available | Positive | 3742801 - 3743148 | 13539.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

