Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tagaturonate reductase | SAMN05421820_10598 | Not Available | Positive | 3702350 - 3703837 | 55220.6 |
| alpha-l-fucosidase | SAMN05421820_10599 | Not Available | Positive | 3704041 - 3705480 | 54571.8 |
| alpha-l-fucosidase 2 | SAMN05421820_105100 | Not Available | Positive | 3705609 - 3708023 | 89320.9 |
| hexosaminidase | SAMN05421820_105101 | Not Available | Positive | 3708044 - 3709951 | 71903.1 |
| arac-type dna-binding protein | SAMN05421820_105102 | Not Available | Negative | 3709980 - 3710849 | 33572.8 |
| d-threo-aldose 1-dehydrogenase | SAMN05421820_105103 | Not Available | Positive | 3711004 - 3712035 | 38702.5 |
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | SAMN05421820_105104 | Not Available | Positive | 3712032 - 3713048 | 36954.0 |
| iron complex outermembrane recepter protein | SAMN05421820_105105 | Not Available | Negative | 3713193 - 3715586 | 88546.0 |
| hypothetical protein | SAMN05421820_105106 | Not Available | Positive | 3715799 - 3716011 | 7950.12 |
| hypothetical protein | SAMN05421820_105107 | Not Available | Positive | 3716234 - 3717049 | 29960.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

