Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421820_10568 | Not Available | Positive | 3668518 - 3669234 | 25211.5 |
| ricin-type beta-trefoil lectin domain-like | SAMN05421820_10569 | Not Available | Negative | 3669327 - 3670592 | 45702.6 |
| membrane-associated phospholipid phosphatase | SAMN05421820_10570 | Not Available | Negative | 3670712 - 3671395 | 26163.7 |
| predicted atpase | SAMN05421820_10571 | Not Available | Negative | 3671491 - 3672222 | 27319.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_10572 | Not Available | Negative | 3672225 - 3672974 | 28637.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_10573 | Not Available | Negative | 3672998 - 3674269 | 47629.3 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN05421820_10574 | Not Available | Positive | 3674480 - 3677728 | 122814.0 |
| methyltransferase domain-containing protein | SAMN05421820_10575 | Not Available | Positive | 3677730 - 3678479 | 28780.7 |
| glycosyl transferase family 2 | SAMN05421820_10576 | Not Available | Negative | 3678504 - 3679403 | 34800.6 |
| methyltransferase domain-containing protein | SAMN05421820_10577 | Not Available | Negative | 3679406 - 3680173 | 29490.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

