Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily b | SAMN05421820_10114 | Not Available | Negative | 42883 - 44622 | 64915.1 |
| membrane associated serine protease, rhomboid family | SAMN05421820_10115 | Not Available | Positive | 44730 - 45365 | 23986.9 |
| helix-turn-helix | SAMN05421820_10116 | Not Available | Positive | 45579 - 45857 | 10467.6 |
| dna-binding transcriptional regulator, acrr family | SAMN05421820_10117 | Not Available | Positive | 46325 - 46972 | 24956.6 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421820_10118 | Not Available | Negative | 46978 - 47661 | 26573.4 |
| hypothetical protein | SAMN05421820_10119 | Not Available | Negative | 47743 - 47955 | 7973.45 |
| hypothetical protein | SAMN05421820_10120 | Not Available | Negative | 48273 - 48566 | 11228.3 |
| methylamine utilisation protein maue | SAMN05421820_10121 | Not Available | Negative | 48578 - 49090 | 19585.9 |
| nadph:quinone reductase | SAMN05421820_10122 | Not Available | Negative | 49167 - 50162 | 35255.7 |
| dna-binding transcriptional regulator, hxlr family | SAMN05421820_10123 | Not Available | Positive | 50287 - 50631 | 13372.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

