Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylpyruvate dioxygenase | SAMN05421820_104426 | Not Available | Negative | 3586919 - 3588007 | 41019.0 |
| phenylalanine-4-hydroxylase, monomeric form | SAMN05421820_104427 | Not Available | Negative | 3588017 - 3590098 | 79021.8 |
| glycolate oxidase | SAMN05421820_104428 | Not Available | Negative | 3590229 - 3591644 | 51554.4 |
| amino acid adenylation domain-containing protein | SAMN05421820_104429 | Not Available | Negative | 3591645 - 3596090 | 166551.0 |
| hypothetical protein | SAMN05421820_1051 | Not Available | Positive | 3596398 - 3597759 | 51471.0 |
| orf6n domain-containing protein | SAMN05421820_1052 | Not Available | Positive | 3597776 - 3598333 | 21836.7 |
| tetratricopeptide repeat-containing protein | SAMN05421820_1053 | Not Available | Positive | 3599486 - 3601168 | 64472.8 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421820_1054 | Not Available | Positive | 3601180 - 3601845 | 25143.5 |
| hypothetical protein | SAMN05421820_1055 | Not Available | Negative | 3601866 - 3602255 | 14732.3 |
| hypothetical protein | SAMN05421820_1056 | Not Available | Negative | 3602273 - 3602905 | 24120.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

