Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_104416 | Not Available | Positive | 3573041 - 3573457 | 14862.3 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN05421820_104417 | Not Available | Negative | 3573463 - 3574149 | 25841.6 |
| duf218 domain-containing protein | SAMN05421820_104418 | Not Available | Negative | 3574248 - 3575498 | 46775.7 |
| susd family protein | SAMN05421820_104419 | Not Available | Negative | 3575580 - 3576950 | 50649.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_104420 | Not Available | Negative | 3576962 - 3580255 | 118599.0 |
| fecr protein | SAMN05421820_104421 | Not Available | Negative | 3580345 - 3581367 | 38263.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_104422 | Not Available | Negative | 3581428 - 3581976 | 21493.0 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05421820_104423 | Not Available | Negative | 3582092 - 3583681 | 61028.3 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421820_104424 | Not Available | Negative | 3583694 - 3586165 | 93130.9 |
| surfactin synthase thioesterase subunit | SAMN05421820_104425 | Not Available | Negative | 3586200 - 3586904 | 27027.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

