Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN05421820_104396 | Not Available | Negative | 3546053 - 3550213 | 157762.0 |
| laci family transcriptional regulator | SAMN05421820_104397 | Not Available | Negative | 3550237 - 3551271 | 38350.0 |
| xylulokinase | SAMN05421820_104398 | Not Available | Positive | 3551391 - 3552869 | 53841.4 |
| xylose isomerase | SAMN05421820_104399 | Not Available | Positive | 3553022 - 3554353 | 49949.7 |
| solute:na+ symporter, sss family | SAMN05421820_104400 | Not Available | Positive | 3554374 - 3556062 | 61341.4 |
| oxidoreductase molybdopterin binding domain-containing protein | SAMN05421820_104401 | Not Available | Negative | 3556088 - 3556591 | 18603.6 |
| uroporphyrin-iii c-methyltransferase | SAMN05421820_104402 | Not Available | Negative | 3556632 - 3557363 | 26070.0 |
| nitrite reductase (nadh) large subunit | SAMN05421820_104403 | Not Available | Positive | 3557644 - 3560157 | 91989.5 |
| nitrite reductase (nadh) small subunit | SAMN05421820_104404 | Not Available | Positive | 3560111 - 3560515 | 15018.1 |
| adenylyltransferase and sulfurtransferase | SAMN05421820_104405 | Not Available | Positive | 3560566 - 3561576 | 37328.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

