Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | SAMN05421820_104386 | Not Available | Negative | 3530636 - 3531811 | 42553.4 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN05421820_104387 | Not Available | Negative | 3531945 - 3533426 | 55231.4 |
| transcriptional regulator | SAMN05421820_104388 | Not Available | Positive | 3533502 - 3534107 | 23356.9 |
| ribosomal protein s18 acetylase rimi | SAMN05421820_104389 | Not Available | Positive | 3534129 - 3534647 | 19891.6 |
| polyhydroxybutyrate depolymerase | SAMN05421820_104390 | Not Available | Negative | 3534655 - 3535530 | 32614.2 |
| helix-turn-helix domain-containing protein | SAMN05421820_104391 | Not Available | Negative | 3535625 - 3536686 | 40670.1 |
| hypothetical protein | SAMN05421820_104392 | Not Available | Negative | 3536806 - 3538194 | 50761.3 |
| starch-binding associating with outer membrane | SAMN05421820_104393 | Not Available | Negative | 3538245 - 3539843 | 59010.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_104394 | Not Available | Negative | 3539861 - 3542974 | 113750.0 |
| alpha-d-xyloside xylohydrolase | SAMN05421820_104395 | Not Available | Negative | 3543074 - 3545929 | 108969.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

