Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN05421820_104336 | Not Available | Negative | 3446817 - 3448217 | 51951.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_104337 | Not Available | Negative | 3448230 - 3451949 | 139179.0 |
| fecr protein | SAMN05421820_104338 | Not Available | Negative | 3452095 - 3453216 | 41332.3 |
| abc-2 type transport system permease protein | SAMN05421820_104339 | Not Available | Negative | 3453290 - 3455542 | 83465.7 |
| abc-2 type transport system atp-binding protein | SAMN05421820_104340 | Not Available | Negative | 3455547 - 3456482 | 34599.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_104341 | Not Available | Negative | 3456554 - 3457135 | 22488.6 |
| helix-turn-helix domain-containing protein | SAMN05421820_104342 | Not Available | Negative | 3457205 - 3458092 | 34090.2 |
| alpha-l-fucosidase | SAMN05421820_104343 | Not Available | Negative | 3458137 - 3459792 | 62365.6 |
| doxx protein | SAMN05421820_104344 | Not Available | Positive | 3460008 - 3460451 | 16017.8 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05421820_104345 | Not Available | Negative | 3460498 - 3460950 | 16702.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

