Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starvation-inducible dna-binding protein | SAMN05421820_104316 | Not Available | Negative | 3422904 - 3423377 | 17998.3 |
| putative oxidoreductase | SAMN05421820_104317 | Not Available | Negative | 3423396 - 3423827 | 16273.2 |
| hypothetical protein | SAMN05421820_104318 | Not Available | Negative | 3423831 - 3425717 | 70519.6 |
| cytosol aminopeptidase family, n-terminal domain | SAMN05421820_104319 | Not Available | Negative | 3425747 - 3426454 | 24952.4 |
| alginate export | SAMN05421820_104320 | Not Available | Negative | 3426466 - 3427845 | 52036.3 |
| nicotinamidase-related amidase | SAMN05421820_104321 | Not Available | Negative | 3427864 - 3428496 | 22812.5 |
| sigma-54 interaction domain-containing protein | SAMN05421820_104322 | Not Available | Positive | 3428689 - 3429795 | 40425.4 |
| regulatory protein, fis family | SAMN05421820_104323 | Not Available | Positive | 3429923 - 3431884 | 72824.0 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN05421820_104324 | Not Available | Positive | 3431868 - 3434330 | 92759.3 |
| hypothetical protein | SAMN05421820_104325 | Not Available | Positive | 3434496 - 3435329 | 31753.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

