Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nad+) | SAMN05421820_104306 | Not Available | Positive | 3412266 - 3413798 | 55373.1 |
| fad/fmn-containing dehydrogenase | SAMN05421820_104307 | Not Available | Positive | 3413810 - 3416749 | 108876.0 |
| hypothetical protein | SAMN05421820_104308 | Not Available | Negative | 3416744 - 3417892 | 41690.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_104309 | Not Available | Negative | 3417876 - 3418463 | 22321.6 |
| hypothetical protein | SAMN05421820_104310 | Not Available | Positive | 3418698 - 3419060 | 13294.2 |
| ycei-like domain-containing protein | SAMN05421820_104311 | Not Available | Positive | 3419072 - 3419617 | 20077.5 |
| hypothetical protein | SAMN05421820_104312 | Not Available | Positive | 3419617 - 3420570 | 35571.4 |
| non-heme chloroperoxidase | SAMN05421820_104313 | Not Available | Negative | 3420695 - 3421516 | 30034.8 |
| uncharacterized membrane protein | SAMN05421820_104314 | Not Available | Negative | 3421573 - 3422211 | 24235.4 |
| uncharacterized membrane protein yoak, upf0700 family | SAMN05421820_104315 | Not Available | Negative | 3422213 - 3422893 | 24170.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

