Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | SAMN05421820_104296 | Not Available | Negative | 3400973 - 3401428 | 17619.5 |
| solute:na+ symporter, sss family | SAMN05421820_104297 | Not Available | Negative | 3401626 - 3403185 | 57189.0 |
| l-alanine-dl-glutamate epimerase | SAMN05421820_104298 | Not Available | Negative | 3403201 - 3404373 | 44702.6 |
| d-threo-aldose 1-dehydrogenase | SAMN05421820_104299 | Not Available | Negative | 3404361 - 3405284 | 33470.2 |
| hypothetical protein | SAMN05421820_104300 | Not Available | Negative | 3405292 - 3407616 | 85216.7 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN05421820_104301 | Not Available | Negative | 3407791 - 3408699 | 35452.2 |
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN05421820_104302 | Not Available | Positive | 3408917 - 3409267 | 13019.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05421820_104303 | Not Available | Negative | 3409279 - 3410175 | 33895.2 |
| saccharopine dehydrogenase, nadp-dependent | SAMN05421820_104304 | Not Available | Positive | 3410252 - 3411346 | 40169.2 |
| protein of unknown function | SAMN05421820_104305 | Not Available | Positive | 3411353 - 3412264 | 34879.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

