Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN05421820_104276 | Not Available | Positive | 3365803 - 3367164 | 51110.1 |
| laci family transcriptional regulator | SAMN05421820_104277 | Not Available | Negative | 3367130 - 3368164 | 38052.7 |
| cytochrome c | SAMN05421820_104278 | Not Available | Positive | 3368300 - 3368698 | 13909.1 |
| hypothetical protein | SAMN05421820_104279 | Not Available | Positive | 3368711 - 3369457 | 28083.4 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05421820_104280 | Not Available | Positive | 3369473 - 3371695 | 82406.9 |
| fucose permease | SAMN05421820_104281 | Not Available | Positive | 3371728 - 3373017 | 46351.2 |
| alpha-l-fucosidase 2 | SAMN05421820_104282 | Not Available | Positive | 3373045 - 3375456 | 88863.3 |
| hypothetical protein | SAMN05421820_104283 | Not Available | Negative | 3375480 - 3375908 | 16097.3 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05421820_104284 | Not Available | Negative | 3375949 - 3377205 | 47096.4 |
| hypothetical protein | SAMN05421820_104285 | Not Available | Negative | 3377412 - 3379655 | 83594.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

