Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | SAMN05421820_104266 | Not Available | Positive | 3354707 - 3356038 | 49962.7 |
| alpha-1,2-mannosidase, putative | SAMN05421820_104267 | Not Available | Negative | 3356134 - 3358851 | 101698.0 |
| arac-type dna-binding protein | SAMN05421820_104268 | Not Available | Positive | 3359120 - 3359863 | 28341.0 |
| protein of unknown function | SAMN05421820_104269 | Not Available | Positive | 3359900 - 3360331 | 17027.3 |
| transmembrane family 220, helix | SAMN05421820_104270 | Not Available | Positive | 3360416 - 3360787 | 14236.6 |
| hypothetical protein | SAMN05421820_104271 | Not Available | Positive | 3360795 - 3361499 | 27011.0 |
| hypothetical protein | SAMN05421820_104272 | Not Available | Positive | 3361514 - 3362500 | 37067.2 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05421820_104273 | Not Available | Positive | 3362508 - 3363386 | 31473.9 |
| 3-dehydroquinate synthase | SAMN05421820_104274 | Not Available | Positive | 3363398 - 3364576 | 43625.1 |
| hypothetical protein | SAMN05421820_104275 | Not Available | Positive | 3364578 - 3365786 | 45510.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

