Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN05421820_104256 | Not Available | Negative | 3336940 - 3338634 | 62149.7 |
| protein of unknown function | SAMN05421820_104257 | Not Available | Negative | 3338674 - 3340266 | 58277.8 |
| hypothetical protein | SAMN05421820_104258 | Not Available | Negative | 3340335 - 3341108 | 28849.8 |
| starch-binding associating with outer membrane | SAMN05421820_104259 | Not Available | Negative | 3341077 - 3342621 | 58499.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_104260 | Not Available | Negative | 3342627 - 3345779 | 115914.0 |
| protein of unknown function | SAMN05421820_104261 | Not Available | Negative | 3345801 - 3346928 | 42830.7 |
| fasciclin domain-containing protein | SAMN05421820_104262 | Not Available | Negative | 3346909 - 3348021 | 42312.6 |
| starch-binding associating with outer membrane | SAMN05421820_104263 | Not Available | Negative | 3348021 - 3349526 | 56293.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_104264 | Not Available | Negative | 3349547 - 3352468 | 109111.0 |
| xylulokinase | SAMN05421820_104265 | Not Available | Positive | 3353137 - 3354615 | 54183.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

