Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05421820_104226 | Not Available | Negative | 3299226 - 3300317 | 41468.2 |
| fmn-dependent nadh-azoreductase | SAMN05421820_104227 | Not Available | Positive | 3300421 - 3301071 | 24514.6 |
| uncharacterized conserved protein | SAMN05421820_104228 | Not Available | Positive | 3301096 - 3301431 | 12376.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_104229 | Not Available | Positive | 3301435 - 3302712 | 48849.6 |
| two-component system, lytt family, response regulator | SAMN05421820_104230 | Not Available | Negative | 3302674 - 3303000 | 12384.4 |
| kynurenine formamidase | SAMN05421820_104231 | Not Available | Negative | 3303286 - 3304179 | 33982.7 |
| glycosyl transferase family 2 | SAMN05421820_104232 | Not Available | Positive | 3304471 - 3305163 | 25650.6 |
| methyltransferase fkbm domain-containing protein | SAMN05421820_104233 | Not Available | Positive | 3305171 - 3305779 | 23067.4 |
| hypothetical protein | SAMN05421820_104234 | Not Available | Positive | 3305780 - 3306952 | 44456.0 |
| hypothetical protein | SAMN05421820_104235 | Not Available | Positive | 3306980 - 3308062 | 42477.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

