Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) domain-containing protein | SAMN05421820_104216 | Not Available | Positive | 3283379 - 3284545 | 43424.9 |
| ligand-binding sensor domain-containing protein | SAMN05421820_104217 | Not Available | Negative | 3284549 - 3288586 | 151371.0 |
| ricin-type beta-trefoil lectin domain-like | SAMN05421820_104218 | Not Available | Positive | 3288804 - 3290117 | 47826.5 |
| ricin-type beta-trefoil lectin domain-like | SAMN05421820_104219 | Not Available | Positive | 3290161 - 3291471 | 47633.2 |
| hypothetical protein | SAMN05421820_104220 | Not Available | Positive | 3291577 - 3292434 | 31948.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_104221 | Not Available | Positive | 3292577 - 3295732 | 117570.0 |
| starch-binding associating with outer membrane | SAMN05421820_104222 | Not Available | Positive | 3295774 - 3297498 | 63758.9 |
| hypothetical protein | SAMN05421820_104223 | Not Available | Positive | 3297643 - 3297990 | 12915.1 |
| hypothetical protein | SAMN05421820_104224 | Not Available | Negative | 3297938 - 3298564 | 23570.4 |
| hypothetical protein | SAMN05421820_104225 | Not Available | Negative | 3298554 - 3299051 | 17914.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

