Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN05421820_104186 | Not Available | Negative | 3248437 - 3251052 | 99691.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_104187 | Not Available | Positive | 3251439 - 3251981 | 21298.9 |
| fecr protein | SAMN05421820_104188 | Not Available | Positive | 3252090 - 3253268 | 43837.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_104189 | Not Available | Positive | 3253432 - 3256995 | 133199.0 |
| susd family protein | SAMN05421820_104190 | Not Available | Positive | 3257007 - 3258419 | 52348.0 |
| peroxiredoxin | SAMN05421820_104191 | Not Available | Positive | 3258447 - 3259589 | 40980.4 |
| protein of unknown function | SAMN05421820_104192 | Not Available | Negative | 3259668 - 3260378 | 27087.0 |
| hypothetical protein | SAMN05421820_104193 | Not Available | Negative | 3260385 - 3261083 | 26282.6 |
| hypothetical protein | SAMN05421820_104194 | Not Available | Negative | 3261101 - 3261547 | 16266.1 |
| histidine kinase | SAMN05421820_104195 | Not Available | Negative | 3261640 - 3263553 | 73061.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

