Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_104176 | Not Available | Negative | 3236839 - 3237186 | 11484.6 |
| hypothetical protein | SAMN05421820_104177 | Not Available | Positive | 3237636 - 3238163 | 19805.6 |
| ppgpp synthetase catalytic domain-containing protein (rela/spot-type nucleotidyltranferase) | SAMN05421820_104178 | Not Available | Negative | 3238829 - 3239800 | 37400.6 |
| protein of unknown function duf262 | SAMN05421820_104179 | Not Available | Negative | 3239802 - 3240866 | 41885.6 |
| hypothetical protein | SAMN05421820_104180 | Not Available | Negative | 3240876 - 3241532 | 25026.8 |
| predicted atpase | SAMN05421820_104181 | Not Available | Negative | 3241536 - 3243155 | 61424.5 |
| hypothetical protein | SAMN05421820_104182 | Not Available | Positive | 3243719 - 3245311 | 61500.7 |
| n-6 dna methylase | SAMN05421820_104183 | Not Available | Negative | 3245344 - 3247194 | 71343.7 |
| hypothetical protein | SAMN05421820_104184 | Not Available | Negative | 3247197 - 3247766 | 22115.3 |
| hypothetical protein | SAMN05421820_104185 | Not Available | Negative | 3247756 - 3248433 | 26115.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

