Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel domain-containing protein | SAMN05421820_104126 | Not Available | Negative | 3161506 - 3162132 | 22673.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_104127 | Not Available | Positive | 3162266 - 3162838 | 22317.1 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421820_104128 | Not Available | Positive | 3162850 - 3163809 | 35745.9 |
| tonb-dependent receptor plug domain | SAMN05421820_104129 | Not Available | Positive | 3163811 - 3166330 | 94324.4 |
| protein of unknown function | SAMN05421820_104130 | Not Available | Positive | 3166305 - 3167162 | 32382.8 |
| type ix secretion system membrane protein, porp/sprf family | SAMN05421820_104131 | Not Available | Negative | 3167219 - 3168133 | 32970.1 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421820_104132 | Not Available | Negative | 3168142 - 3171336 | 115217.0 |
| glycosyl hydrolases family 18 | SAMN05421820_104133 | Not Available | Negative | 3171393 - 3172433 | 38779.4 |
| starch-binding associating with outer membrane | SAMN05421820_104134 | Not Available | Negative | 3172455 - 3174065 | 60243.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_104135 | Not Available | Negative | 3174090 - 3177503 | 123844.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

