Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421820_104116 | Not Available | Positive | 3150969 - 3151742 | 28224.6 |
| catalase-peroxidase | SAMN05421820_104117 | Not Available | Negative | 3151835 - 3154108 | 82842.7 |
| exodeoxyribonuclease-3 | SAMN05421820_104118 | Not Available | Negative | 3154231 - 3155001 | 29360.2 |
| 3-methyladenine dna glycosylase alkd | SAMN05421820_104119 | Not Available | Negative | 3155108 - 3155773 | 24685.0 |
| lrp/asnc family transcriptional regulator, regulator for asna, asnc and gida | SAMN05421820_104120 | Not Available | Negative | 3155853 - 3156305 | 17117.8 |
| ornithine--oxo-acid transaminase | SAMN05421820_104121 | Not Available | Positive | 3156447 - 3157706 | 45889.1 |
| arginase | SAMN05421820_104122 | Not Available | Positive | 3157713 - 3158672 | 35050.8 |
| hypothetical protein | SAMN05421820_104123 | Not Available | Negative | 3158748 - 3159479 | 27286.6 |
| dna-binding response regulator, lytr/algr family | SAMN05421820_104124 | Not Available | Negative | 3159614 - 3160381 | 30125.6 |
| histidine kinase | SAMN05421820_104125 | Not Available | Negative | 3160378 - 3161445 | 40939.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

